Search results for "biotic and abiotic stress"

showing 8 items of 8 documents

Identification of Stress Associated microRNAs in Solanum lycopersicum by High-Throughput Sequencing

2019

Tomato (Solanum lycopersicum) is one of the most important crops around the world and also a model plant to study response to stress. High-throughput sequencing was used to analyse the microRNA (miRNA) profile of tomato plants undergoing five biotic and abiotic stress conditions (drought, heat, P. syringae infection, B. cinerea infection, and herbivore insect attack with Leptinotarsa decemlineata larvae) and one chemical treatment with a plant defence inducer, hexanoic acid. We identified 104 conserved miRNAs belonging to 37 families and we predicted 61 novel tomato miRNAs. Among those 165 miRNAs, 41 were stress-responsive. Reverse transcription quantitative PCR (RT-qPCR) was used to valida…

0106 biological sciences0301 basic medicineEstrèslcsh:QH426-470ATP-binding cassette transporter01 natural sciencesbehavioral disciplines and activitiesDNA sequencingdifferential expression03 medical and health sciencesDifferential expressionSolanum lycopersicummicroRNAGeneticsTomàquetsGeneGenetics (clinical)Abiotic componentGeneticsbiotic and abiotic stress responseHigh-throughput sequencingbiologyAbiotic stressfungi<i>Solanum lycopersicum</i>food and beverageshigh-throughput sequencingbiology.organism_classificationlcsh:Genetics030104 developmental biologyReal-time polymerase chain reactionmiRNAsBiotic and abiotic stress responseSolanumHexanoic acidhexanoic acidmiRNA targets010606 plant biology & botanyGenes
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Current view of nitric oxide-responsive genes in plants

2009

International audience; Significant efforts have been directed towards the identification of genes differentially regulated through nitric oxide (NO)-dependent processes. These efforts comprise the use of medium- and large-scale transcriptomic analyses including microarray and cDNA-amplification fragment length polymorphism (AFLP) approaches. Numerous putative NO-responsive genes have been identified in plant tissues and cell suspensions with transcript levels altered by artificially released NO, or endogenously produced. Comparative analysis of the data from such transcriptomic analyses in Arabidopsis reveals that a significant part of these genes encode proteins related to plant adaptive …

0106 biological sciencesPlant ScienceBiology01 natural sciencesNitric oxide synthase-like enzymeTranscriptomic analysisTranscriptome03 medical and health sciencesL-NAME[ SDV.SA.AGRO ] Life Sciences [q-bio]/Agricultural sciences/AgronomyTranscription (biology)Complementary DNAArabidopsisGenetics[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyGeneTranscription factor030304 developmental biologyGenetics0303 health sciencesBiotic and abiotic stressesNitric oxide-responsive genesPromoterNitric oxideGeneral Medicinebiology.organism_classificationStress biotiqueDNA microarrayAgronomy and Crop Science010606 plant biology & botany
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Combined Stress Conditions in Melon Induce Non-additive Effects in the Core miRNA Regulatory Network

2021

Climate change has been associated with a higher incidence of combined adverse environmental conditions that can promote a significant decrease in crop productivity. However, knowledge on how a combination of stresses might affect plant development is still scarce. MicroRNAs (miRNAs) have been proposed as potential targets for improving crop productivity. Here, we have combined deep-sequencing, computational characterization of responsive miRNAs and validation of their regulatory role in a comprehensive analysis of response of melon to several combinations of four stresses (cold, salinity, short day, and infection with a fungus). Twenty-two miRNA families responding to double and/or triple …

MelonBiotic and abiotic stressRNA regulatory networksPlant cultureDifferentially expressed mirnasComputational biologyPlant ScienceBiologyCrop productivitybiotic and abiotic stressSB1-1110crop production and climate changePlant developmentGENETICAMiRNAs and stress response in Cucumis melomiRNAs and stress response in Cucumis melomicroRNACrop production and climate changeRNA regulatory networks; RNA-seq and systems biology; biotic and abiotic stress; crop production and climate change; miRNAs and stress response in Cucumis meloStress conditionsTranscription factorGeneRNA-seq and systems biologyOriginal ResearchFrontiers in Plant Science
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Multi-sensor spectral synergies for crop stress detection and monitoring in the optical domain: A review

2022

Remote detection and monitoring of the vegetation responses to stress became relevant for sustainable agriculture. Ongoing developments in optical remote sensing technologies have provided tools to increase our understanding of stress-related physiological processes. Therefore, this study aimed to provide an overview of the main spectral technologies and retrieval approaches for detecting crop stress in agriculture. Firstly, we present integrated views on: i) biotic and abiotic stress factors, the phases of stress, and respective plant responses, and ii) the affected traits, appropriate spectral domains and corresponding methods for measuring traits remotely. Secondly, representative result…

Precision agriculturemultispectralbiotic and abiotic stresatelliteSoil Sciencesolar induced fluorescenceGeologymulti-modalPrecision agriculture multi-modal solar-induced fluorescence satellite hyperspectral multispectral biotic and abiotic stressUNESCO::CIENCIAS TECNOLÓGICASITC-HYBRIDhyperspectralITC-ISI-JOURNAL-ARTICLEddc:550Computers in Earth Sciences
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Recovery and genotyping ancient Sicilian monumental olive trees

2023

The long-lived and evergreen olive tree dominates the Mediterranean landscape, representing an agroecological and cultural symbol and a genetic heritage of inestimable value. Sicily, for historical, geographical, and cultural reasons, has a very rich and distinctive olive germplasm. In this work, a large survey was conducted to discover, collect, and characterize the genetic diversity of centennial monumental olive trees from historical sites, such as the Greek Temple Valley (Agrigento), ancient gardens, or farmland present in the western part of the island. Trees were chosen based on their height, trunk, stump size, and presumed age; particularly, only olive trees with an age estimated at …

Settore AGR/03 - Arboricoltura Generale E Coltivazioni ArboreeSettore AGR/05 - Assestamento Forestale E SelvicolturaSettore AGR/07 - Genetica AgrariaGeneral MedicineOlea europaea olive genetic resources microsatellite markers on-farm and in-situ conservation strategy putative biotic and abiotic stress resilienceFrontiers in Conservation Science
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The biomass of algae and algal extracts in agricultural production

2018

Fertilizers and plant growth regulators (PGRs) based on seaweeds are commonly known, having been produced and utilized for dozens of years. Algae are rich in carbohydrates, proteins, minerals and chemical compounds that belong mainly to the following groups: polysaccharides, polyphenols, phlorotannins, plant pigments, unsaturated fatty acids, sterols and plant hormones. Agricultural formulations containing algal extracts stimulate the growth and yielding of plants in a very efficient way because of their action at low concentrations. Concentrations of phytohormones depend mainly on the botanical origin of the obtained biomass, the time and place of its collection and the method of extractio…

biotic and abiotic stress in plantsseaweed extractsbiostimulants in agriculture
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Identification of Stress Associated microRNAs in

2019

Tomato (Solanum lycopersicum) is one of the most important crops around the world and also a model plant to study response to stress. High-throughput sequencing was used to analyse the microRNA (miRNA) profile of tomato plants undergoing five biotic and abiotic stress conditions (drought, heat, P. syringae infection, B. cinerea infection, and herbivore insect attack with Leptinotarsa decemlineata larvae) and one chemical treatment with a plant defence inducer, hexanoic acid. We identified 104 conserved miRNAs belonging to 37 families and we predicted 61 novel tomato miRNAs. Among those 165 miRNAs, 41 were stress-responsive. Reverse transcription quantitative PCR (RT-qPCR) was used to valida…

biotic and abiotic stress responsefungifood and beveragesHigh-Throughput Nucleotide Sequencinghigh-throughput sequencingbehavioral disciplines and activitiesArticledifferential expressionDroughtsMicroRNAsSolanum lycopersicumGene Expression Regulation PlantStress PhysiologicalmiRNAshexanoic acidmiRNA targetsPlant ProteinsGenes
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Grass Pea

2011

Grass pea (Lathyrus. sativus L.) is an annual legume crop with high protein content and remarkable resistance to extreme environmental conditions, including fl ooding, drought, salinity and low soil fertility, and a signifi cant degree of resistance to biotic stress agents. It is rightly considered one of the most promising sources of calories and protein for the vast and expanding populations of drought-prone and marginal areas of Asia and Africa and as an interesting alternative for cropping systems diversifi cation in marginal lands in Europe, Australia and America. It is a dual purpose crop with great agronomic potential as a grain and forage legume. Nevertheless, as a result of the lit…

resistance[SDV] Life Sciences [q-bio][SDE] Environmental Sciencesbiotic and abiotic stressesbreedinglathyrismgenetic transformation[SDV.BV] Life Sciences [q-bio]/Vegetal Biologyexpression analysisgenome mappingODAPdiversity analysis
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